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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953270.1_cds_XP_016492500.1_82705
CDS Infomation

[gene=LOC107812006] [db_xref=GeneID:107812006] [protein=polygalacturonase-like] [protein_id=XP_016492500.1] [location=complement(join(25783..26004,26097..26325,26854..27143,27945..28388))] [gbkey=CDS]
Sequence

ATGGCTAAGCTTTTAATTTCTTGGTGTTTTGTCTTCTTCTTTTGTTTTGGATTCATTTTC
TTGAAATCAAATGCAGCATCAGTAACGTACAATGTGTTAAGCTTTGGAGCAAAATCAGAC
GGCAAAAGTGATGCAACTCAGCCATTTCTGAAAGCATGGGTAGCTGCATGCAGCTCAGTG
AAGTCAGCCACCATTTACGTTCCTCGTGGACAATACTTAATTAAGGCAGCAACTTTTAGA
GGGCCATGCAAAAGTAAAATCACTGTAAAAATCGATGGAACTCTTGTGGCTCCGGCGGAT
TATCGCGCCGTTGGCAACTCCGGCTACTGGATTTTGTTTATTAAGGTTAGCCGGATTTCG
GTCGTCGGAGGAACTCTTGATGGAAATGGAGCTGGATTTTGGGCTTGCCGGAAGACAGGG
AAGAATTGCCCTGTTGGTGCTAGGTCTATAACGTTCAACTGGGCAAATGATGTTGTGATT
AAAGGCTTAACATCAGTCAATAGCCAGCTAATGCACTTGGTGATCAATAGCTGCAAGAAT
GTGATGGTTAAAAATGTAAGAATAATAGCACCAGACTTAAGTCCCAATACTGATGGCATT
CATGTCCAATCTTCAACTGGTGTTACTATCACTGGTACAAGTATCAAAACTGGAGATGAT
TGTATATCTGTTGGCCCTGGCACAAGAAACCTTTGGATGGAAAAGATTCAATGTGGCCCT
GGCCATGGTGTTAGCATTGGAAGTCTAGCAAGAGATTACAAAGAAGATGGTGTGCAGAAC
GTGACATTAATTAATTCAGTATTTTCTGGATCTGATAATGGATTAAGAATAAAGTCTTGG
GCAAGACCCAGCACTGGTTTTGTCACCAACATTAATTATCAAAACATTATCATGAGGAAT
GTTGACAATCCAATCATCATTGATCAAAATTACTGTCCCAACAACCAAGGCTGTCCAGGC
CAGACTTCTGGTGTAAAGATCAATCAAGTGACGTACAAAAATATATTAGGAACATCAGCA
ACGAAAGTAGCCATGACTTTTGACTGCAGTCCAAGCAATCCATGCAGCGGAATAAAGTTA
CAAGACATAAAGCTTACTTATTTGAACGGAAAAGCTCAATCTATTTGCAAGAATATTAGA
GGAAATACTGGAGGAATCATCTTGCCTGATAATTGTTTATATTAA

Peptide Sequence

PEP ID

XP_016492500.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MAKLLISWCFVFFFCFGFIFLKSNAASVTYNVLSFGAKSDGKSDATQPFLKAWVAACSSV
KSATIYVPRGQYLIKAATFRGPCKSKITVKIDGTLVAPADYRAVGNSGYWILFIKVSRIS
VVGGTLDGNGAGFWACRKTGKNCPVGARSITFNWANDVVIKGLTSVNSQLMHLVINSCKN
VMVKNVRIIAPDLSPNTDGIHVQSSTGVTITGTSIKTGDDCISVGPGTRNLWMEKIQCGP
GHGVSIGSLARDYKEDGVQNVTLINSVFSGSDNGLRIKSWARPSTGFVTNINYQNIIMRN
VDNPIIIDQNYCPNNQGCPGQTSGVKINQVTYKNILGTSATKVAMTFDCSPSNPCSGIKL
QDIKLTYLNGKAQSICKNIRGNTGGIILPDNCLY

Transcript Sequence

Gene sequence data has not been registered.